Rv3696c - c.471A>G
Drug resistance types
1 Sensitive
2 RR-TB
15 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 11 |
| La3;lineage2.1;lineage6.3 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7 | 1 |
| lineage5.2 | 2 |
| lineage4 | 1 |
| lineage2.2.1 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| 2 | |
| lineage1.2.1.2 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR26112321 | Other | lineage1.2.1.2.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4830353 | Other | La1.7 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816656 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | ERR9786604 | Other | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1180172 | Other | lineage2.2.1 | None |
|---|
