Rv0006 - c.927G>C
Drug resistance types
7 Sensitive
2 RR-TB
17 HR-TB
4 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 15 |
| lineage4.9;lineage6.3 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage5.2 | 2 |
| M.canetti;lineage4.9 | 2 |
| La1.7;lineage4.9 | 3 |
| La1.7;lineage4.9;lineage7 | 2 |
| lineage2.2.1.1 | 1 |
| La1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| 1 | |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.1;lineage4.8 | 1 |
| lineage1.2.1.2 | 1 |
| La3;lineage4.9 | 5 |
| La1.7 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage3 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 2 |
| La1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 64 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29231479 | RR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR23961549 | Other | La1.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR9786843 | Other | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR9896144 | Other | lineage3 | None | SRR1169249 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR767972 | Sensitive | lineage4.5 | th | ERR212138 | HR-TB | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR6046485 | Other | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR751835 | Sensitive | lineage4.5 | th | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
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