Rv1221 - c.354C>T


Drug resistance types
87 Sensitive 0 RR-TB 36 HR-TB 16 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 12 Other
lineage Counts
lineage Count
lineage1.2.1.2 133
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.9 4
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage1.2.1.2.1 2
lineage2.2.1 1
La1.6;La3;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 151
Geographic prevalence
Country level data for this variant is available for 24 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR16057997 Sensitive lineage1.2.1.2 None
SRR7131243 HR-TB lineage1.2.1.2 None
SRR18714774 MDR-TB lineage1.2.1.2 None
SRR7131172 Sensitive lineage1.2.1.2 None
SRR12006600 Sensitive lineage1.2.1.2 None
DRR188946 Sensitive lineage1.2.1.2 None
ERR4829604 Sensitive lineage1.2.1.2 it
SRR21727888 Sensitive lineage1.2.1.2 None
SRR12006713 Sensitive lineage1.2.1.2 None
SRR21747060 MDR-TB lineage1.2.1.2 None
SRR19128051 Sensitive lineage1.2.1.2 None
SRR21733024 Sensitive lineage1.2.1.2 None
SRR11342377 Sensitive lineage1.2.1.2 None
ERR11775971 MDR-TB lineage1.2.1.2 None
SRR28045010 Sensitive lineage1.2.1.2 None
SRR6152654 HR-TB lineage1.2.1.2 ca
SRR6045900 HR-TB lineage1.2.1.2 gb
DRR188818 Sensitive lineage1.2.1.2 None
ERR9125404 Sensitive lineage1.2.1.2 None
SRR27450404 Sensitive lineage1.2.1.2 None
SRR20969489 Sensitive lineage1.2.1.2 None
SRR6152774 Sensitive lineage1.2.1.2 ca
ERR9125688 Sensitive lineage1.2.1.2 None
SRR22249910 Sensitive lineage1.2.1.2 None
SRR21733119 Sensitive lineage1.2.1.2 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR14520057 Sensitive lineage1.2.1.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR22251630 Sensitive lineage1.2.1.2 None
SRR6397936 HR-TB lineage1.2.1.2 ca
SRR22249420 HR-TB lineage1.2.1.2 None
ERR3256288 Sensitive lineage1.2.1.2 ph
DRR034486 Sensitive lineage1.2.1.2 None
SRR21733323 Sensitive lineage1.2.1.2 None
SRR16058295 Sensitive lineage1.2.1.2 None
ERR7361935 HR-TB lineage1.2.1.2 None
ERR550956 HR-TB lineage1.2.1.2 de
ERR2513290 Sensitive lineage1.2.1.2 None
ERR6336804 HR-TB lineage1.2.1.2 None
DRR130082 MDR-TB lineage1.2.1.2 None
ERR3256223 Sensitive lineage1.2.1.2 ph
SRR6397949 MDR-TB lineage1.2.1.2 ca
SRR21726729 Sensitive lineage1.2.1.2 None
ERR9125863 Sensitive lineage1.2.1.2 None
SRR21732893 Sensitive lineage1.2.1.2 None
ERR9125340 Sensitive lineage1.2.1.2 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9125298 Sensitive lineage1.2.1.2 None
SRR16058679 MDR-TB lineage1.2.1.2 None
ERR6336784 Sensitive lineage1.2.1.2 None
SRR27450180 Sensitive lineage1.2.1.2 None
ERR6336731 Sensitive lineage1.2.1.2 None
ERR6336801 HR-TB lineage1.2.1.2 None
SRR5341299 HR-TB lineage4.9 None
SRR6152806 Sensitive lineage1.2.1.2 ca
SRR16058301 Sensitive lineage1.2.1.2 None
SRR16058377 Sensitive lineage1.2.1.2 None
SRR28859688 HR-TB lineage1.2.1.2 None
SRR18289190 Sensitive lineage1.2.1.2 None
ERR4815146 Sensitive lineage1.2.1.2 gb
ERR11082729 MDR-TB lineage1.2.1.2 None
SRR16058202 Sensitive lineage1.2.1.2 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR22249905 Sensitive lineage1.2.1.2 None
SRR16058363 HR-TB lineage1.2.1.2 None
ERR4818103 Sensitive lineage1.2.1.2 None
SRR22048346 Sensitive lineage1.2.1.2 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR16058332 Sensitive lineage1.2.1.2 None
SRR5341300 HR-TB lineage4.9 None
ERR3256241 MDR-TB lineage1.2.1.2 ph
ERR4817940 HR-TB lineage1.2.1.2 None
ERR4816486 Sensitive lineage1.2.1.2 gb
ERR6336796 HR-TB lineage1.2.1.2 None
SRR18911563 Sensitive lineage1.2.1.2 None
ERR11081422 Sensitive lineage1.2.1.2 None
SRR18911866 Sensitive lineage1.2.1.2 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2513230 Sensitive lineage1.2.1.2 gb
SRR5341453 Other lineage4.9 None
ERR4822230 Other lineage1.2.1.2 None
SRR16103911 Sensitive lineage1.2.1.2 None
SRR27450422 Sensitive lineage1.2.1.2 None
SRR6397526 HR-TB lineage1.2.1.2.1 ca
ERR4820832 Sensitive lineage1.2.1.2 None
SRR22251431 Sensitive lineage1.2.1.2 None
ERR3256251 HR-TB lineage1.2.1.2 ph
SRR12006625 Sensitive lineage1.2.1.2 None
ERR9125359 Sensitive lineage1.2.1.2 None
SRR16089684 Other lineage1.2.1.2 None
ERR4822362 MDR-TB lineage1.2.1.2 None
SRR2100428 Sensitive lineage1.2.1.2 None
SRR6930927 MDR-TB lineage1.2.1.2 None
ERR9125745 Sensitive lineage1.2.1.2 None
ERR11067726 Other lineage1.2.1.2 None
SRR28409537 Sensitive lineage1.2.1.2 None
ERR11775962 Sensitive lineage1.2.1.2 None
ERR11775969 MDR-TB lineage1.2.1.2 None
SRR28045172 Sensitive lineage1.2.1.2 None
ERR3256181 Sensitive lineage1.2.1.2 ph
SRR6045734 HR-TB lineage1.2.1.2 gb
ERR9125292 Sensitive lineage1.2.1.2 None
SRR10040312 MDR-TB lineage2.2.1 None
SRR16115080 HR-TB lineage1.2.1.2 None
ERR4829300 Sensitive lineage1.2.1.2 None
SRR18911875 HR-TB lineage1.2.1.2 None
SRR5817479 MDR-TB lineage1.2.1.2 au
ERR7902645 Sensitive lineage1.2.1.2 None
SRR21689967 Sensitive lineage1.2.1.2 None
ERR9125656 Sensitive lineage1.2.1.2 None
ERR11067717 Other lineage1.2.1.2 None
ERR9125362 Sensitive lineage1.2.1.2 None
ERR9125349 Other lineage1.2.1.2 None
ERR9125667 HR-TB lineage1.2.1.2 None
SRR28170710 Sensitive lineage1.2.1.2 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR16058037 Other lineage1.2.1.2 None
SRR12006632 Sensitive lineage1.2.1.2.1 None
SRR16058471 Sensitive lineage1.2.1.2 None
SRR6152741 Sensitive lineage1.2.1.2 ca
ERR9125470 MDR-TB lineage1.2.1.2 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR12006624 HR-TB lineage1.2.1.2 None
ERR4816415 Sensitive lineage1.2.1.2 gb
SRR21733102 Sensitive lineage1.2.1.2 None
SRR16058320 Sensitive lineage1.2.1.2 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR10465817 Sensitive lineage1.2.1.2 None
SRR21663279 Sensitive lineage1.2.1.2 None
SRR22251473 Other lineage1.2.1.2 None
ERR9125415 Sensitive lineage1.2.1.2 None
SRR5341308 HR-TB lineage4.9 None
ERR2516771 MDR-TB lineage1.2.1.2 gb
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR22251770 Sensitive lineage1.2.1.2 None
SRR12006517 Sensitive lineage1.2.1.2 None
SRR21727758 HR-TB lineage1.2.1.2 None
SRR16058521 Sensitive lineage1.2.1.2 None
SRR22250201 HR-TB lineage1.2.1.2 None
SRR21689818 Other lineage1.2.1.2 None
SRR21690685 Sensitive lineage1.2.1.2 None
SRR12006550 Other lineage1.2.1.2 None
ERR7362034 MDR-TB lineage1.2.1.2 None
SRR6152646 HR-TB lineage1.2.1.2 ca
ERR9657198 Sensitive lineage1.2.1.2 None
SRR16115073 Sensitive lineage1.2.1.2 None
ERR9124913 Sensitive lineage1.2.1.2 None
SRR16058047 Sensitive lineage1.2.1.2 None
ERR3256273 HR-TB lineage1.2.1.2 ph
SRR16058027 Sensitive lineage1.2.1.2 None