Rv0006 - c.1278C>T


Drug resistance types
16 Sensitive 1 RR-TB 21 HR-TB 11 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 64 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 4
M.canetti;lineage2.1;lineage4.9 2
La3;lineage1.1.2 1
lineage4.9 21
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 7
lineage4.1.1.1 1
lineage4.9;lineage6.3 5
lineage2.1;lineage4.9;lineage6.3 5
lineage4.1.2.1 6
lineage2.1 4
La3;lineage2.1;lineage4.9 3
La1.7;lineage3;lineage4.9;lineage7 1
7
lineage1.1.2 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.9 1
La3;lineage4.8 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La3;lineage2.2.1 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1 4
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
lineage5.2 2
lineage3.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.1.1.3 1
lineage2.2.2;lineage4 1
lineage4.2;lineage4.9 1
lineage1.1.3.1 4
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
La3;M.canetti;lineage2.2.1 1
La1.7;lineage4.9;lineage7 3
lineage2.2.1.1 3
lineage4 1
lineage2.1;lineage4.3.2;lineage4.9 1
La3 1
lineage4.3.4.2.1 1
lineage1.2.1.2 1
lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 115
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR5341400 Sensitive lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR9121188 Sensitive lineage4.1.2.1 None
ERR176751 Other lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1184294 Other lineage4.9 None
SRR1184381 MDR-TB None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4818969 Sensitive lineage1.1.2 gb
SRR3675232 Other lineage4.1.2.1 None
SRR1173778 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1710057 Other lineage2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR2513470 Other lineage4.2.2.2 None
SRR6789626 Other None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR12416840 MDR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR11252612 Other La3;lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR29053270 Other lineage1.1.3.1 None
ERR4407463 HR-TB None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR13267626 Sensitive lineage1.1.3.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR7902605 Sensitive lineage1.1.3.1 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR15722985 Sensitive lineage2.2.1.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR21675604 Other lineage1.1.3.1 None
SRR21659813 Sensitive lineage2.2.1.1 None
SRR6044876 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675260 Sensitive lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR553374 Sensitive lineage4.1.2.1 de
ERR12015083 Other La3;lineage4.8 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR7131023 Other lineage4.1.2.1 None
ERR2514692 Other None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502908 HR-TB lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR29051476 Sensitive lineage2.2.1.1 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR1172951 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR4195268 Sensitive lineage4.1.2.1 None