Rv2754c - c.564C>T
Drug resistance types
3 Sensitive
3 RR-TB
8 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage4.9 | 6 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.8.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 2 |
| La3;lineage4.9 | 3 |
| lineage1.2.1.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR212033 | Other | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR6797274 | Sensitive | lineage4.1.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR7851372 | Other | La1.8.2 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR176751 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR2027295 | Sensitive | lineage1.2.1.2.1 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None |
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