lineage | Count |
---|---|
lineage7;lineage2.2.1.2 | 1 |
La1.8.1 | 1 |
lineage4.9;La1 | 1 |
lineage4.9 | 5 |
lineage4;lineage2.2 | 1 |
lineage4 | 34 |
29 | |
La1.2 | 1 |
lineage2.1 | 1 |
lineage4.6.2.2 | 3 |
lineage1.1.3.2 | 1 |
lineage4.1 | 1 |
lineage2.2 | 7 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4;lineage3.1 | 1 |
lineage1.1.2 | 1 |
lineage4.8 | 2 |
lineage4.7 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage2.2.1 | 4 |
lineage1.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 102 |
ID | Drug resistance | Lineage | Country iso2 | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692887 | Other | None | SRR3675510 | Other | None | SRR23961549 | Other | La1.2 | None | SRR26159035 | Sensitive | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816466 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | ERR4798874 | Sensitive | lineage1.1.3.2 | in | SRR6046611 | HR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831117 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4024991 | Other | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4797264 | Sensitive | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769521 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR6866022 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786507 | Sensitive | lineage4.7 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | SRR1165692 | MDR-TB | lineage2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | ERR9786843 | Other | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None |
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