lineage | Count |
---|---|
lineage4.9 | 44 |
19 | |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 2 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage4 | 47 |
lineage2.2.1 | 19 |
lineage3 | 3 |
lineage4.1.2.1 | 4 |
lineage4.3.2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.2.1 | 1 |
lineage4.7 | 2 |
La2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.4.2 | 1 |
lineage6.1.1 | 2 |
lineage5.1.2 | 1 |
La1.2 | 1 |
lineage3.1.2 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage4.8 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
spoligotype | Count |
---|---|
None | 159 |
ID | Drug resistance | Lineage | Country iso2 | SRR1180444 | Sensitive | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR16157123 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | ERR11069022 | Other | lineage2.2.1 | None | ERR4816470 | Other | lineage3 | None | ERR176740 | HR-TB | None | SRR3675265 | Other | lineage4 | None | ERR4815550 | Other | lineage4 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR718207 | Sensitive | lineage2.2.1 | th | ERR718253 | Sensitive | lineage2.2.1 | th | ERR752095 | Sensitive | lineage2.2.1 | th | ERR718251 | Sensitive | lineage2.2.1 | th | ERR718351 | Sensitive | lineage2.2.1 | th | ERR752271 | Sensitive | lineage2.2.1 | th | ERR768031 | Sensitive | lineage2.2.1 | th | ERR751768 | Sensitive | lineage2.2.1 | th | ERR718232 | Sensitive | lineage2.2.1 | th | ERR4818536 | Other | lineage4.9 | None | ERR718486 | Sensitive | lineage2.2.1 | th | ERR718518 | Sensitive | lineage2.2.1 | th | ERR4817998 | Other | lineage3 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR718510 | Sensitive | lineage2.2.1 | th | ERR768036 | Sensitive | lineage2.2.1 | th | ERR4819462 | Other | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR775772 | Sensitive | lineage2.2.1 | th | ERR751863 | Sensitive | lineage2.2.1 | th | ERR752165 | Sensitive | lineage2.2.1 | th | SRR6045503 | HR-TB | None | ERR767959 | Sensitive | lineage2.2.1 | th | SRR5341470 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4828958 | Sensitive | lineage4.7 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR323053 | HR-TB | None | ERR4831117 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | ERR323039 | HR-TB | None | ERR11466044 | Other | lineage4.1.1.3 | None | DRR188519 | Other | lineage4.4.2 | None | ERR067699 | HR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR363499 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797046 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4811493 | HR-TB | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None |
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