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SRA data
EBG00000313339
- n.1348C>T
Drug resistance types
8 Sensitive
0 RR-TB
11 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
6
lineage2.2.1
3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage3
2
lineage6.1.1
2
lineage1.1.2
2
lineage4.9;lineage9
2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
1
M.canetti;lineage2.1;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
42
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1035294
MDR-TB
lineage4.1.2.1
br
ERR1213875
Sensitive
lineage4.3.3
de
ERR133986
Other
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
None
ERR158583
MDR-TB
La3;M.canetti;lineage2;lineage4.2;lineage4.3
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2124083
HR-TB
lineage4.6.1.2
None
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