EBG00000313339 - n.1348C>T
Drug resistance types
9 Sensitive
0 RR-TB
11 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9 | 7 |
| lineage6.1.1 | 2 |
| M.canetti;lineage4.2 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage1.1.2 | 2 |
| La1.8.1 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3 | 2 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1 | 3 |
| lineage4.9;lineage9 | 2 |
| La1.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.3.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.9.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 43 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181091 | Other | lineage2.2.1.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR28119843 | Sensitive | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR230111 | Sensitive | lineage1.1.2 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR29050859 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR2100735 | Sensitive | lineage1.1.2 | None | ERR6198317 | Other | La1.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR18593221 | MDR-TB | lineage3 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR3675502 | Sensitive | lineage4.9 | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de |
|---|
