Rv2752c - c.-280A>G


Drug resistance types
1 Sensitive 5 RR-TB 28 HR-TB 13 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 48 Other
lineage Counts
lineage Count
lineage4.9 10
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La2;lineage4.9 1
lineage4.1.3 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.1 1
M.canetti;lineage4.9 4
lineage1.2.2.2 1
lineage2.1;lineage4.9;lineage6.3 7
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
10
lineage4.9;lineage6.3 2
lineage3 6
La3;lineage2.1;lineage4.9 1
lineage6.3.1 1
lineage2.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.2.1.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage2.1;lineage4.9 2
lineage6.1.1 2
La2;lineage4.9;lineage9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1 2
lineage6.1.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
lineage4.1.2.1 3
La3;lineage2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;lineage4.9 5
La3;lineage1.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 3
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4 1
La1.7;M.canetti;lineage4.9 2
lineage4.3.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage6.3 1
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 97
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7496472 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR7496509 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR6789626 Other None
SRR25827682 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
ERR266537 Other lineage3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR2503565 Sensitive lineage4.2.1.1 fi
SRR1172310 MDR-TB lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR403343 Other lineage3 None
ERR176751 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR3675457 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787165 Other lineage6.1.3 None
ERR3283018 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR7496517 Other None
ERR9787197 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9787014 RR-TB lineage6.1.1 None
SRR18213756 Other lineage3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR2100756 Other lineage3 None
SRR1180226 HR-TB lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR1165628 Other La3;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786604 Other None
SRR18213713 HR-TB None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None