EBG00000313339 - n.1334T>C
Drug resistance types
9 Sensitive
3 RR-TB
65 HR-TB
11 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 2 |
| lineage2.2.1 | 8 |
| lineage4.8 | 2 |
| lineage4.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| 48 | |
| lineage4.3.3 | 3 |
| lineage3;lineage2.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage3 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 17 |
| La1.7.1 | 1 |
| lineage1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.6.4 | 2 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4 | 1 |
| La1.8.1 | 2 |
| lineage6.1.1 | 2 |
| lineage4.9 | 14 |
| lineage3.1.2 | 1 |
| La1.2 | 2 |
| La1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 131 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18911980 | Sensitive | lineage2.2.2 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR19317525 | Sensitive | lineage4.8 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675482 | HR-TB | None | ERR4813861 | Other | lineage4.3.3 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR3275220 | Other | lineage3 | nl | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR176740 | HR-TB | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341470 | HR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693239 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | ERR2446144 | Other | lineage3 | nl | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | ERR2815606 | Other | La1.7.1 | None | SRR6046514 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6855982 | Sensitive | lineage4.3.2 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311099 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311081 | HR-TB | None | ERR323053 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR123925 | Sensitive | lineage2.2.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR3468544 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR4188350 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797036 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4772225 | Other | La1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6358837 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR736839 | Other | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR245758 | Other | lineage4.9.1 | None | ERR736835 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736865 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR7911361 | MDR-TB | lineage4.3.3 | None | ERR8976043 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR987722 | HR-TB | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861141 | HR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861660 | Sensitive | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR16370609 | Sensitive | lineage4.8 | None | SRR1640750 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR1791696 | Other | La1.8.1 | None |
|---|
