EBG00000313339 - n.1296_1300delCATCC
Drug resistance types
5 Sensitive
1 RR-TB
15 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 2 |
| 27 | |
| lineage2.2.1 | 4 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage6.1.1 | 2 |
| La1.8.1 | 1 |
| lineage4.9 | 2 |
| lineage4.1 | 1 |
| lineage4 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR4798406 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6198317 | Other | La1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR28119823 | Sensitive | lineage4.9 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR3675550 | Other | None | SRR5341418 | Other | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6046133 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | ERR1034652 | Other | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR3797014 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3439432 | Other | None | ERR3797043 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797036 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None |
|---|
