Rv3794 - c.1893G>C


Drug resistance types
10 Sensitive 1 RR-TB 18 HR-TB 8 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 22 Other
lineage Counts
lineage Count
lineage4.9 18
lineage6.1.1 2
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3 2
M.canetti;lineage4.9 4
La3;lineage4.9 2
lineage4.6.2.2 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage3.1.2.2 1
lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
1
lineage4.3.2;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 59
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1172310 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR124636 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR5341461 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323062 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR987722 MDR-TB None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR17832802 HR-TB lineage3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None