EBG00000313339 - n.1288C>T
Drug resistance types
6 Sensitive
13 RR-TB
18 HR-TB
5 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 15 |
| 10 | |
| lineage1.1.1 | 1 |
| lineage3 | 1 |
| lineage4.4 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1 | 9 |
| lineage4.1.2.1 | 4 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| La2 | 1 |
| lineage4.1.1.3 | 1 |
| La1.8.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.7 | 1 |
| lineage4.2.1 | 2 |
| lineage4.9;lineage4.1 | 1 |
| lineage4 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage6.1.1 | 2 |
| La1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173770 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR12006526 | Sensitive | lineage1.1.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR25389433 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389432 | Pre-XDR-TB | lineage2.2.1 | None | SRR25389548 | Pre-XDR-TB | lineage2.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR25389434 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1723779 | Other | lineage2.2.1 | cn | ERR4817069 | RR-TB | None | ERR176740 | HR-TB | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502524 | HR-TB | La2 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR495013 | Other | lineage4.1.1.3 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7516368 | MDR-TB | lineage4.3.3 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796629 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736865 | HR-TB | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | SRR1062928 | RR-TB | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769506 | Sensitive | La1.3 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1140736 | RR-TB | None | SRR1172310 | HR-TB | None | SRR1172152 | MDR-TB | lineage4.3.3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None |
|---|
