Rv3596c - c.1323C>T
Drug resistance types
4 Sensitive
0 RR-TB
12 HR-TB
5 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 3 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.7.1;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage3 | 2 |
| lineage6.1.1 | 2 |
| lineage4.1 | 4 |
| La1.7 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.9 | 4 |
| 1 | |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 37 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR400529 | Other | lineage3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR552160 | Sensitive | lineage4.1 | None | ERR552159 | Sensitive | lineage4.1 | None | ERR4830353 | Other | La1.7 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR552160_ERR552159 | Other | lineage4.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SAMEA2534452 | Sensitive | lineage4.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR21732903 | Sensitive | lineage1.1.2 | None |
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