lineage | Count |
---|---|
1 | |
lineage4.9 | 4 |
lineage4.3.2;lineage4.9 | 1 |
lineage6.1.1 | 2 |
lineage4.1 | 4 |
lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
La1.7;lineage4.9 | 3 |
La1.7.1;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
lineage3 | 2 |
M.canetti;lineage2.2.2;lineage6.2 | 2 |
La1.7 | 1 |
lineage4.9;lineage9 | 2 |
lineage3.1.2.2 | 1 |
La2;lineage4.9;lineage9 | 1 |
La1.7;M.canetti;lineage4.9 | 2 |
M.canetti;lineage2.2 | 2 |
lineage1.1.2 | 1 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
La2;lineage4.9 | 1 |
M.canetti;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 37 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR987722 | MDR-TB | None | |
SRR1180226 | HR-TB | lineage4.9 | None |
ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
ERR9787014 | Other | lineage6.1.1 | None |
ERR552160_ERR552159 | Other | lineage4.1 | None |
ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
SRR3675501 | Other | La1.7;lineage4.9 | None |
SRR3675267 | Other | La1.7;lineage4.9 | None |
ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
ERR400529 | Other | lineage3 | None |
ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
ERR552160 | Sensitive | lineage4.1 | None |
ERR552159 | Sensitive | lineage4.1 | None |
ERR4830353 | Other | La1.7 | None |
SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
SRR29097026 | Other | lineage4.9 | None |
ERR3799304 | Other | lineage6.1.1 | None |
SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None |
SRR21732903 | Sensitive | lineage1.1.2 | None |
SAMEA2534452 | Sensitive | lineage4.1 | None |
SRR17832802 | HR-TB | lineage3 | None |
ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
SRR1172310 | HR-TB | lineage4.9 | None |
ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
SRR3675385 | Other | La1.7;lineage4.9 | None |
ERR323039 | HR-TB | La2;lineage4.9 | None |
SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
SRR3675449 | Other | M.canetti;lineage4.9 | None |
SRR1183111 | HR-TB | lineage4.9 | None |