Rv3596c - c.1323C>T
Drug resistance types
4 Sensitive
0 RR-TB
12 HR-TB
5 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| 1 | |
| lineage4.9 | 4 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1 | 4 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7;lineage4.9 | 3 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage3 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.7 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage3.1.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage1.1.2 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 37 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR987722 | MDR-TB | None | |
| SRR1180226 | HR-TB | lineage4.9 | None |
| ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
| ERR9787014 | Other | lineage6.1.1 | None |
| ERR552160_ERR552159 | Other | lineage4.1 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR3675501 | Other | La1.7;lineage4.9 | None |
| SRR3675267 | Other | La1.7;lineage4.9 | None |
| ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
| ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR400529 | Other | lineage3 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR552160 | Sensitive | lineage4.1 | None |
| ERR552159 | Sensitive | lineage4.1 | None |
| ERR4830353 | Other | La1.7 | None |
| SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
| ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
| SRR29097026 | Other | lineage4.9 | None |
| ERR3799304 | Other | lineage6.1.1 | None |
| SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None |
| SRR21732903 | Sensitive | lineage1.1.2 | None |
| SAMEA2534452 | Sensitive | lineage4.1 | None |
| SRR17832802 | HR-TB | lineage3 | None |
| ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
| SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR1172310 | HR-TB | lineage4.9 | None |
| ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
| SRR3675385 | Other | La1.7;lineage4.9 | None |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
| SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
| SRR3675449 | Other | M.canetti;lineage4.9 | None |
| SRR1183111 | HR-TB | lineage4.9 | None |
