Rv0006 - c.325C>T
Drug resistance types
16 Sensitive
2 RR-TB
90 HR-TB
6 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| La1 | 1 |
| 73 | |
| lineage3 | 3 |
| lineage3.1.2 | 1 |
| lineage2.2.1 | 5 |
| lineage4 | 6 |
| lineage6.1.1 | 2 |
| lineage5.2 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6 | 1 |
| La3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2.1 | 6 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.8 | 2 |
| lineage4.9 | 19 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.2 | 1 |
| La1.8.1 | 3 |
| lineage2.2 | 3 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.1 | 1 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.1 | 1 |
| La1.2 | 1 |
| lineage4;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 151 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798262 | HR-TB | La1 | None | ERR6358837 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR736865 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9787030 | Sensitive | lineage6 | None | ERR987722 | HR-TB | None | SRR1169249 | Other | La3 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1002698 | Sensitive | lineage4.8 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1169306 | Other | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13861305 | Other | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR12142341 | HR-TB | None | SRR1174897 | HR-TB | None | SRR13861266 | Sensitive | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR13861720 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR15368973 | Other | None | SRR17832802 | HR-TB | lineage3 | None | SRR1640750 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR23174162 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | ERR212034 | HR-TB | None | ERR176740 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | SRR3742665 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR5341470 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045399 | Other | None | SRR6045327 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6257062 | Sensitive | lineage4.8 | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR5311099 | HR-TB | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6831950 | Other | lineage4.3.3 | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323039 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR323063 | HR-TB | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR3445504 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1063857 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797082 | Other | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4769497 | HR-TB | La1.2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR2514746 | Sensitive | lineage4.1.1.3 | gb | ERR4769521 | HR-TB | None |
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