Rv0668 - c.1164C>A
Drug resistance types
60 Sensitive
9 RR-TB
9 HR-TB
4 MDR-TB
23 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 23 |
| lineage4.9 | 23 |
| lineage4 | 41 |
| lineage4.8 | 1 |
| 5 | |
| lineage4.8.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage3 | 2 |
| lineage4.5 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage5.1.2 | 1 |
| La1.3 | 3 |
| lineage4.9;La1.3 | 1 |
| lineage3.1.2;lineage2.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3;lineage2.2.1 | 2 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175250 | HR-TB | lineage2.2.1 | None | ERR11068844 | XDR-TB | lineage2.2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675387 | Sensitive | None | SRR3675590 | Sensitive | lineage4.8.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2516898 | Pre-XDR-TB | lineage2.2.1 | gb | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6045503 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502943 | HR-TB | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR349266 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400382 | Pre-XDR-TB | lineage2.2.1 | gb | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769555 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4796339 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796532 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796986 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796547 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797638 | Pre-XDR-TB | lineage3.1.2;lineage2.2.1 | in | ERR4797392 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797291 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797826 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798722 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798681 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798431 | HR-TB | None | ERR4799021 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4798998 | Pre-XDR-TB | lineage3;lineage2.2.1 | in | ERR4798878 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799360 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799838 | Pre-XDR-TB | lineage2.2.1 | in | ERR4810624 | HR-TB | lineage2.2 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4800622 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR6865502 | Sensitive | lineage4 | None |
|---|
