Rv3793 - c.1134G>C
Drug resistance types
7 Sensitive
2 RR-TB
113 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 9 |
| lineage4;lineage3.1 | 1 |
| 121 | |
| La1.2 | 2 |
| lineage3 | 2 |
| lineage4.3.3 | 3 |
| lineage4.1.2.1 | 8 |
| lineage2.2 | 5 |
| lineage4.8 | 2 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| La3 | 1 |
| lineage3.1 | 3 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 7 |
| lineage4.5 | 2 |
| La1.8.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage4.9;La1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1 | 3 |
| lineage1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 190 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4407463 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769450 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4797474 | Other | None | ERR4800341 | Other | lineage3 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736867 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR5336148 | Other | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6866410 | Sensitive | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR8976043 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736874 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9117709 | HR-TB | None | ERR9786569 | Other | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786604 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172951 | Other | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172728 | MDR-TB | None | SRR10808805 | Sensitive | None | SRR1173400 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1173629 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR13861322 | Other | lineage4.9 | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR1196546 | HR-TB | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861575 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR1791696 | Other | La1.8.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969677 | HR-TB | lineage2 | None | ERR11081258 | Other | lineage4.8 | None | SRR26558642 | HR-TB | lineage2.1 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961549 | Other | La1.2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176751 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675311 | Other | None | SRR3675383 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675501 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3742665 | HR-TB | None | ERR4818615 | Other | None | SRR7496472 | Other | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5007188 | Other | lineage4 | None | SRR5341330 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341456 | Other | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR6044790 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6046225 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045053 | Other | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046046 | Other | None | SRR6325442 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046492 | Other | None | SRR6325444 | HR-TB | None | ERR278594 | HR-TB | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR323036 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR323038 | HR-TB | None | SRR7496509 | Other | None | ERR323055 | HR-TB | None | ERR323043 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797069 | Other | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None |
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