Rv3793 - c.1134G>C


Drug resistance types
3 Sensitive 9 RR-TB 70 HR-TB 32 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 64 Other
lineage Counts
lineage Count
lineage4.9;lineage9 1
lineage2.2.1 3
lineage2.1;lineage4.9;lineage6.3 5
9
La1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.3 2
M.canetti;lineage2.1;lineage4.9 22
lineage3 2
lineage4.4.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2.1;lineage4.9 11
lineage4.9;lineage7 1
La3;lineage2.2.1 1
lineage4.9 16
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.3.3 2
La1.2 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
lineage4.1.2.1 6
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La3;lineage4.9 4
La1.7;lineage4.9;lineage6 1
lineage2.1;lineage4.9 9
La3;lineage2.1;lineage4.9 1
lineage6.3.1 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.6.3;lineage4.9;lineage6.3 1
La1.7 1
lineage4 2
lineage2.2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage6.1.3 1
lineage4.8 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 1
M.canetti;lineage2.2 3
M.canetti;lineage4.9 1
lineage2.2.2 1
La3;lineage4.3.4 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.8.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.2.1.2;lineage7 1
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
La3;lineage2 1
lineage2.2 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 1
M.canetti;lineage4.3.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 181
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675236 Other None
SRR23961542 Other La1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4800341 Other lineage3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR23961549 Other La1.2 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR3283055 HR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786604 Other None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6046878 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1166821 Other lineage4.1.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR161037 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176643 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675243 Other lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR9786569 Other lineage4.8 None
ERR3468607 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6045053 Other lineage4 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1169306 Other La3;lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR5917710 Other lineage4.1.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1791696 Other La1.8.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
SRR26558642 HR-TB lineage2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9787197 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR29096203 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR4821053 RR-TB lineage3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6789626 Other None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None