Rv1819c - c.-214G>A


Drug resistance types
1 Sensitive 1 RR-TB 20 HR-TB 8 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.9 8
lineage3 3
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.9 3
lineage2.2.1;lineage3 1
lineage4.1.3 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.9 1
lineage2.2.1 4
lineage4.1.2.1 6
La3;lineage2 1
lineage4.1.2 1
lineage2.1 2
lineage2.1;lineage4.9;lineage6.3 5
La3;lineage2.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.1.3 1
lineage3.1.2.1 1
10
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage6.3 2
La3;lineage4.8 1
lineage1.1.2 1
lineage6.3.1 1
La3;lineage4.9 1
lineage4.7 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 1
lineage4.6.2.2 1
lineage4.9;lineage6.3 3
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9 1
lineage4.8 2
La3;lineage3 1
lineage4.1.1.1 2
spoligotype Counts
spoligotype Count
None 82
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044942 HR-TB lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4818347 Other lineage4.1.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
ERR4796604 Sensitive lineage3.1.2.1 in
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786671 Other None
ERR9786604 Other None
SRR6789626 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR9787197 Other None
ERR4817060 Other None
SRR28119777 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4820854 Other lineage4.1.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR234659 HR-TB None
SRR25827682 Other None
SRR7496517 Other None
SRR28119805 Other lineage4.9 None
ERR4816999 Other None
ERR4798493 MDR-TB lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR1023302 MDR-TB La3;lineage3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3797070 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3283018 HR-TB lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786617 Other lineage4.1.1.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9786569 Other lineage4.8 None