Rv3793 - c.1786_1788delTTGinsCTC
Drug resistance types
2 Sensitive
1 RR-TB
12 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4 | 1 |
| lineage4.1.3 | 2 |
| lineage2.2.1 | 5 |
| 8 | |
| lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 5 |
| lineage4.7 | 1 |
| lineage6.3.1 | 1 |
| lineage2.1 | 2 |
| lineage4.9;lineage6.3 | 3 |
| lineage4.3.3;lineage4.3.4.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1.2 | 1 |
| lineage4.6.1 | 1 |
| lineage5.2 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR12015083 | Other | lineage4.8 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4817735 | Other | lineage4.8 | None | ERR2027263 | Other | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4811142 | RR-TB | None | SRR28119753 | Other | lineage4.9 | None | ERR4811311 | Other | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4819932 | Sensitive | lineage4.7 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2.1 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786508 | Sensitive | lineage4.3.3;lineage4.3.4.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | None | ERR4811075 | Other | None | ERR4810741 | HR-TB | None | ERR6358755 | Other | lineage4.6.1 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675236 | Other | None | SRR12416824 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
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