Rv3793 - c.1786_1788delTTGinsCTC
Drug resistance types
3 Sensitive
1 RR-TB
43 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| 54 | |
| lineage4.1.2.1 | 9 |
| lineage4.1.3 | 2 |
| lineage4 | 4 |
| lineage2.2.1 | 5 |
| lineage2 | 2 |
| lineage4.8;La3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1 | 2 |
| lineage5.2 | 2 |
| lineage4.3.4.1;lineage4.3.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.9 | 3 |
| lineage4.3.3 | 2 |
| lineage3.1 | 2 |
| lineage4.5 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.7 | 1 |
| La2 | 1 |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283027 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797069 | Other | None | ERR4407463 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4810741 | HR-TB | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR736874 | HR-TB | None | ERR5336148 | Other | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9117709 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786508 | Sensitive | lineage4.3.4.1;lineage4.3.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1169194 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1173400 | Other | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184380 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR3675465 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR12416824 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | ERR4816999 | Other | None | SRR3675236 | HR-TB | None | SRR3675311 | Other | None | ERR4815752 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR3675572 | Other | None | SRR3742665 | HR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4817060 | RR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4817735 | Other | lineage4.8 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341302 | HR-TB | None | SRR6044790 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341333 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046066 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | SRR6789626 | Other | None | ERR502524 | HR-TB | La2 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR1035157 | Other | lineage4.9 | None | SRR7496509 | Other | None | ERR323043 | HR-TB | None | SRR7496517 | Other | None | ERR3283010 | Other | La1 | None |
|---|
