TB-Profiler
Home
Upload
SRA data
Rv1484
- c.-542C>A
Drug resistance types
22 Sensitive
2 RR-TB
72 HR-TB
9 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
102 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
39
14
lineage2.1;lineage4.9
13
M.canetti;lineage2.1;lineage4.9
11
La3;M.canetti;lineage2.1;lineage4.9
9
lineage4.9;lineage6.3
9
La3;lineage4.9
8
lineage3
6
lineage4.1.2.1
5
lineage2.1;lineage4.9;lineage6.3
5
Showing 1 to 10 of 72 entries
Previous
1
2
3
4
5
…
8
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
209
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1035122
Sensitive
lineage4.9
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1035157
Other
lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR124652
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR126600
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
Showing 1 to 10 of 209 entries
Previous
1
2
3
4
5
…
21
Next