Rv1484 - c.588G>C


Drug resistance types
14 Sensitive 3 RR-TB 31 HR-TB 12 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 113 Other
lineage Counts
lineage Count
lineage4.9 42
lineage5.2 2
16
lineage4 4
lineage4.1.2.1 7
lineage2.1 3
lineage4.9;lineage6.3 7
lineage4.1;lineage4.8 2
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 2
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage6.3.1 1
lineage2.1;lineage4.9 11
La3;lineage1.1.2 1
lineage2.2 2
lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 9
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage2.2.1;lineage6.3 1
La1.2;La1.8.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.2.1 7
lineage4.1.1.1 1
lineage4.7 1
La3;lineage4.9 6
lineage4.1.3 2
lineage2.1;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.4.2.1 1
lineage2.2.1.2;lineage7 1
lineage2.2.1.2 1
M.canetti;lineage2.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 3
La1;lineage4.9 1
lineage4.2.1 1
lineage1.2.2.2 1
La3 2
lineage1.1.3.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage1.1.2 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
lineage3.1.1 1
La1.7;lineage4.9 1
lineage3 1
La1;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 175
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4796929 Sensitive lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1184381 MDR-TB None
SRR28351339 MDR-TB lineage4 None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR6045010 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR5341330 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4816999 Other None
ERR4769450 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR9786507 RR-TB lineage4.7 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR3797064 Other La3;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4769452 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR6044835 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR2514692 Other None
ERR9786671 Other None
ERR176549 Other lineage4.3.4.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
SRR28351584 HR-TB lineage2.2.1 None
SRR3675270 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1175127 Other lineage2.2.1.2 None
SRR12142339 HR-TB lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1169194 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323107 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR9786444 Sensitive lineage4.8 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR1173384 Other lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675248 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675236 Other None
ERR3283044 Other lineage4 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117709 Other None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
ERR9787197 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR29016780 Other lineage4.9 None
SRR18213713 HR-TB None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
SRR6789626 Other None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
ERR702406 Other lineage2.1 None
SRR14782405 HR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR1184294 Other lineage4.9 None