lineage | Count |
---|---|
lineage4.9 | 4 |
61 | |
lineage3;lineage2.2.1 | 1 |
lineage2.2.1 | 3 |
lineage2.2 | 1 |
lineage4 | 8 |
lineage4.8;La3 | 1 |
lineage4.1.2.1 | 6 |
lineage4.1.3 | 2 |
lineage1.1.2 | 1 |
lineage4.6.2.2 | 1 |
lineage6.3.1 | 1 |
lineage3.1 | 1 |
lineage2 | 1 |
lineage4.5 | 1 |
lineage4.3.4.1 | 1 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 | SRR26159043 | Other | lineage4.9 | None | SRR3675571 | HR-TB | None | SRR3675574 | HR-TB | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675236 | HR-TB | None | ERR4816999 | Other | None | ERR4817060 | RR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | SRR6046225 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341387 | Other | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046066 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818394 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4820757 | Sensitive | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341333 | HR-TB | None | SRR6789626 | Other | None | SRR6046540 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR502532 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR3283021 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797069 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR6866022 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR4407463 | HR-TB | None | ERR4811022 | HR-TB | None | ERR702406 | HR-TB | None | ERR6866639 | Other | None | ERR702404 | HR-TB | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR9786604 | Other | None | ERR751326 | Sensitive | lineage4 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR1173400 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1172234 | Other | None | SRR1173153 | HR-TB | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR25827682 | Other | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR19303884 | HR-TB | None |
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