Rv0006 - c.-421_-419delTTGinsCTC
Drug resistance types
2 Sensitive
1 RR-TB
9 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2 | 1 |
| lineage2.1;lineage4.9 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.3.3 | 1 |
| lineage3 | 1 |
| lineage4.9 | 8 |
| lineage2.2.1 | 3 |
| lineage4.9;lineage6.3 | 4 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4 | 1 |
| lineage4.1.3 | 1 |
| lineage2.1 | 2 |
| lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1 | 3 |
| 4 | |
| La3;lineage4.8 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969677 | HR-TB | La3;lineage2 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4800341 | Other | lineage3 | None | SRR7496472 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR702406 | Other | lineage2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR234659 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR6789626 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR1184294 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None |
|---|
