Rv2245 - c.-42T>C
Drug resistance types
0 Sensitive
0 RR-TB
9 HR-TB
0 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 1 |
| lineage4.9 | 4 |
| lineage2.2.1 | 4 |
| 5 | |
| lineage4.9;lineage6.3 | 4 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.2.1 | 4 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 37 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786645 | Other | lineage4.6.2.2 | None | SRR7496472 | Other | lineage4.9 | None | ERR13261073 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR28119752 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR7496517 | Other | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR3675457 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR25827792 | XDR-TB | lineage2.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28351269 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6789626 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None |
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