lineage | Count |
---|---|
lineage2.2.1 | 4 |
75 | |
lineage4.9 | 2 |
lineage4.1.2.1 | 5 |
lineage4 | 2 |
lineage4.1.3 | 2 |
lineage4.6.1.1 | 1 |
lineage2 | 2 |
lineage3 | 1 |
lineage4.3.2 | 1 |
lineage4.8 | 1 |
lineage1.1.2 | 2 |
lineage4.6.2.2 | 1 |
lineage6.3.1 | 1 |
lineage2.2.1.1 | 2 |
lineage3.1 | 1 |
lineage4.5 | 1 |
lineage2.2.1;La3 | 1 |
lineage4.9;La3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 110 |
ID | Drug resistance | Lineage | Country iso2 | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR6045526 | HR-TB | None | ERR1035162 | Other | None | SRR5341418 | Other | None | SRR7496472 | Other | None | SRR5341302 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045399 | Other | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | ERR5311090 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR502889 | Other | None | ERR5311081 | HR-TB | None | ERR323043 | HR-TB | None | SRR8217918 | HR-TB | None | ERR1034652 | Other | None | ERR067681 | HR-TB | None | ERR3797069 | Other | None | ERR3439432 | Other | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798406 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6358837 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1172951 | Other | None | ERR9787197 | Other | None | SRR1172728 | MDR-TB | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1173778 | Other | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR1184294 | HR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR26159043 | Other | lineage4.9 | None | SRR25827682 | Other | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176751 | HR-TB | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675486 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675465 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675502 | Other | None | ERR176643 | HR-TB | None | SRR3675550 | Other | None | ERR2027263 | Other | lineage4 | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None |
---|