Rv3794 - c.1353A>G
Drug resistance types
1 Sensitive
1 RR-TB
12 HR-TB
3 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 7 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 4 |
| 8 | |
| lineage2.1 | 3 |
| lineage4.9 | 7 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage3 | 2 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.3.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage4.1.1.1 | 1 |
| La3 | 1 |
| lineage4.6.2.2 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage1.1.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.2.1 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR502912 | Other | lineage2.2.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR234659 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1172951 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3335781 | Pre-XDR-TB | lineage3 | pk | SRR20969677 | HR-TB | La3;lineage2 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4800341 | Other | lineage3 | None | ERR702406 | Other | lineage2.1 | None | SRR1172817 | Other | La3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR1184294 | Other | lineage4.9 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6789626 | Other | None | SRR1196546 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR7535086 | Other | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR4831282 | Sensitive | lineage4.2.1 | de | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786604 | Other | None | SRR1196583 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None |
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