lineage | Count |
---|---|
lineage2.2 | 3 |
72 | |
lineage4 | 5 |
lineage4.9 | 2 |
lineage4.1.3 | 2 |
lineage4.1.2.1 | 4 |
lineage4.8;lineage4.1 | 1 |
lineage4.3.4.1 | 1 |
lineage4.1 | 1 |
lineage4.5 | 1 |
lineage2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3 | 1 |
lineage3 | 1 |
lineage4.1.2 | 1 |
lineage2.2.1 | 1 |
lineage3.1 | 2 |
spoligotype | Count |
---|---|
None | 100 |
ID | Drug resistance | Lineage | Country iso2 | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283017 | HR-TB | None | ERR1063857 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4811022 | HR-TB | None | ERR3797071 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4188350 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4810741 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769521 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736835 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR9786671 | Other | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR1169306 | Other | None | ERR9786843 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | SRR12142341 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416824 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR176568 | Other | lineage4.3 | None | SRR3675270 | HR-TB | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | ERR212033 | HR-TB | None | ERR4818929 | HR-TB | None | SRR3675574 | HR-TB | None | ERR234659 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | SRR6046133 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2516596 | MDR-TB | lineage3 | nl | ERR2679270 | HR-TB | lineage4.1.2 | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6046514 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | ERR5311090 | HR-TB | None | ERR323036 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR323038 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None |
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