lineage | Count |
---|---|
133 | |
lineage4 | 41 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2 | 3 |
lineage4.9 | 7 |
lineage4.1.2.1 | 5 |
lineage4.6.2.2 | 3 |
lineage4.1.3 | 2 |
La1.2 | 1 |
La1 | 1 |
lineage4.8;La3 | 1 |
lineage6.3.1 | 1 |
lineage4.9;La3 | 1 |
lineage4.3.4 | 1 |
lineage4.1 | 1 |
lineage2.1 | 1 |
lineage4.3 | 1 |
lineage4.1.1.2 | 1 |
lineage4.9;lineage4.6.2 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage2.2.1 | 3 |
spoligotype | Count |
---|---|
None | 211 |
ID | Drug resistance | Lineage | Country iso2 | ERR5311090 | HR-TB | None | ERR323107 | Other | lineage4 | None | SRR7496509 | Other | None | ERR323055 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | SRR7496517 | Other | None | ERR323038 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323063 | HR-TB | None | ERR1034652 | Other | None | ERR067699 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283025 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797014 | Other | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4769521 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR6358837 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736834 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR702406 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | ERR736874 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9117709 | HR-TB | None | ERR9786604 | Other | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | ERR9787197 | Other | None | ERR9786843 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1169306 | Other | None | SRR10809074 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172234 | Other | None | SRR1180996 | HR-TB | lineage4 | None | SRR1172857 | MDR-TB | None | SRR1173568 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1175508 | Other | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR3675486 | HR-TB | None | SRR1640750 | HR-TB | None | SRR19303884 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR4815604 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR19304036 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675221 | HR-TB | None | ERR181744 | HR-TB | None | ERR212001 | HR-TB | None | ERR176751 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675234 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675456 | HR-TB | None | ERR212121 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | SRR7496472 | Other | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341453 | Sensitive | None | ERR4818615 | Other | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341387 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341425 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341333 | HR-TB | None | SRR5341456 | Other | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR2693231 | Other | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045519 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR5311099 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR502532 | HR-TB | None | ERR502943 | HR-TB | None | ERR294266 | HR-TB | None | ERR5311081 | HR-TB | None |
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