Rv0407 - p.Leu68Ile
Drug resistance types
0 Sensitive
1 RR-TB
22 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| 11 | |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.9 | 9 |
| La1.2.BCG | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.1 | 1 |
| La1.7.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage2.1;lineage4.9 | 4 |
| lineage4.6.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 61 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6789626 | Other | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR7496509 | Other | None | SRR7496472 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR234659 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR7240492 | HR-TB | La1.7.1 | None | ERR9786604 | Other | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR1196546 | Other | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797070 | Other | lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | SRR1640750 | Other | None | ERR6866807 | Other | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1173778 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR18213713 | HR-TB | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496517 | Other | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675236 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4800341 | Other | lineage3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1196768 | MDR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
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