Rv3696c - c.1281C>T
Drug resistance types
6 Sensitive
1 RR-TB
11 HR-TB
1 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 6 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 7 |
| lineage4.1.3 | 6 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.2.1 | 2 |
| La3;lineage2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage3.1.2 | 1 |
| 6 | |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675549 | Other | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3803775 | Sensitive | lineage4.1.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR28045632 | Sensitive | lineage3.1.2 | None | ERR234659 | HR-TB | None | SRR3675275 | Other | lineage4.9 | None | SRR6046222 | Sensitive | lineage4.1.3 | gb | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045622 | Sensitive | lineage4.1.3 | gb | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR7517684 | Sensitive | lineage4.1.3 | ci | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR9117709 | Other | None | SRR18213713 | HR-TB | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR1184294 | Other | lineage4.9 | None | ERR1679586 | MDR-TB | lineage4.1.3 | ng | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786148 | Sensitive | lineage4.1.3 | None | ERR9786604 | Other | None | SRR6789626 | Other | None | SRR3675236 | Other | None |
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