lineage | Count |
---|---|
lineage3.1 | 1 |
68 | |
La2 | 1 |
lineage4.1.2.1 | 7 |
lineage4.7 | 1 |
lineage4.9 | 4 |
La1 | 1 |
lineage4.1.3 | 2 |
lineage4.3.2 | 1 |
lineage4.8 | 1 |
lineage5.2 | 2 |
lineage4.6.2.2 | 1 |
lineage4.5 | 1 |
lineage6.2.3 | 1 |
lineage2 | 1 |
lineage4.1 | 1 |
lineage2.2.1 | 4 |
lineage4 | 3 |
lineage2.2 | 1 |
La1.8.1 | 1 |
lineage4;lineage1.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 105 |
ID | Drug resistance | Lineage | Country iso2 | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311090 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7496517 | Other | None | ERR1063862 | HR-TB | None | ERR323038 | HR-TB | None | ERR323043 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797069 | Other | None | ERR4188350 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR6358837 | HR-TB | None | ERR5336148 | Other | None | ERR8976043 | HR-TB | None | ERR736867 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR9787197 | Other | None | ERR9787061 | Sensitive | lineage6.2.3 | None | SRR1640750 | HR-TB | None | SRR19303884 | HR-TB | None | SRR6325445 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR4815604 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR4816999 | Other | None | SRR3675311 | Other | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | SRR3675572 | Other | None | ERR4816585 | Other | lineage2.2 | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818615 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2693239 | HR-TB | None | ERR2514692 | Other | None | SRR6044790 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6045327 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None |
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