Rv1484 - c.-523T>C
Drug resistance types
13 Sensitive
0 RR-TB
98 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| 101 | |
| La1.8.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage4.3.2 | 3 |
| lineage4.1.2.1 | 7 |
| lineage4 | 17 |
| lineage4.7 | 1 |
| lineage4.9 | 14 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 3 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 5 |
| La1 | 2 |
| lineage4.1.3 | 2 |
| lineage3 | 1 |
| lineage2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.9;La1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.8;La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 185 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR4818615 | Other | None | ERR234659 | HR-TB | None | SRR5341313 | HR-TB | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | SRR2100452 | Sensitive | lineage4.3.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341315 | Sensitive | None | SRR6045503 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046397 | Other | None | SRR6046066 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | ERR4799599 | Sensitive | lineage4.3.2 | in | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046540 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | SRR6789626 | Other | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR7496509 | Other | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323053 | HR-TB | None | SRR7496517 | Other | None | SRR7535086 | Other | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323043 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1034634 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283014 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR1063859 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283027 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3283036 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797069 | Other | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4800341 | Other | lineage3 | None | ERR4769521 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173118 | Other | None | SRR1173629 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1183049 | Other | lineage2.2 | None | SRR1173706 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1181020 | Other | lineage2.2.1 | None | SRR15368973 | Other | None | SRR1184372 | MDR-TB | None | SRR1196494 | MDR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR14782405 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR19304036 | HR-TB | None | ERR4815604 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | SRR3675465 | HR-TB | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR3675311 | Other | None | ERR181824 | HR-TB | lineage4 | None | SRR3675236 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816999 | Other | None | ERR181887 | HR-TB | None | SRR3675510 | Other | None | ERR212001 | HR-TB | None | ERR212121 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None |
|---|
