Rv0407 - c.369G>A
Drug resistance types
1 Sensitive
5 RR-TB
17 HR-TB
11 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
92 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1 | 5 |
| lineage4.8 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.9 | 16 |
| lineage4.1.2.1 | 8 |
| 12 | |
| lineage2.1;lineage4.9 | 14 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage6.3.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 7 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4 | 2 |
| lineage3 | 2 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.6.2.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.1 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| La3;lineage2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.7 | 1 |
| La3;lineage1.1.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.3.2 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 128 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None |
| ERR4797054 | Pre-XDR-TB | lineage2.1 | None |
| ERR2229542 | Other | lineage4.8 | None |
| ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None |
| SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR1184294 | Other | lineage4.9 | None |
| ERR3804155 | Other | lineage4.1.2.1 | None |
| ERR9786642 | Other | lineage4.1.2.1 | None |
| SRR25827682 | Other | None | |
| ERR9787197 | Other | None | |
| ERR4817060 | Other | None | |
| ERR9786421 | Other | lineage4.1.2.1 | None |
| ERR4815752 | Other | lineage4.9 | None |
| SRR6045380 | Other | lineage2.1;lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR3675465 | Other | lineage4.9;lineage6.3 | None |
| SRR6045242 | Other | lineage2.1;lineage4.9 | None |
| ERR9786694 | Other | lineage4.1.2.1 | None |
| ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR6046540 | Other | lineage2.1;lineage4.9 | None |
| SRR3675275 | Other | lineage4.9 | None |
| ERR9787139 | Other | lineage6.3.1 | None |
| SRR1710057 | Other | lineage2.1 | None |
| ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR3675214 | Other | lineage4.9 | None |
| SRR1184388 | Other | lineage2.1;lineage4.9 | None |
| ERR736874 | Other | La3;lineage2.1;lineage4.9 | None |
| SRR1173629 | Other | lineage2.1;lineage4.9 | None |
| ERR4817896 | HR-TB | lineage2.2.1 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR3797069 | Other | lineage4.9 | None |
| SRR18003019 | Other | lineage2.2.1 | None |
| SRR18511606 | Sensitive | lineage2.2.2 | None |
| ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR6044790 | Other | lineage2.1;lineage4.9 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR3675446 | RR-TB | lineage4.9 | None |
| SRR3675216 | Other | lineage2.1;lineage4.9 | None |
| SRR26159043 | Other | lineage4.9 | None |
| SRR1184380 | Other | lineage2.1;lineage4.9 | None |
| ERR3283044 | Other | lineage4 | None |
| SRR7535086 | Other | None | |
| ERR4800341 | Other | lineage3 | None |
| ERR702406 | Other | lineage2.1 | None |
| SRR3675549 | Other | lineage4.9 | None |
| ERR5336148 | Other | lineage2.1;lineage6.3 | None |
| ERR9786645 | Other | lineage4.6.2.2 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR7131023 | Other | lineage4.1.2.1 | None |
| ERR3797070 | Other | lineage4.9 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR3675221 | Other | lineage4.9 | None |
| ERR4814352 | Other | lineage2.2.1 | None |
| ERR9786601 | Other | lineage4.1.2.1 | None |
| SRR12142341 | HR-TB | lineage2.1 | None |
| SRR1184372 | MDR-TB | None | |
| SRR6785227 | Other | lineage2.2.1 | None |
| ERR9786440 | Other | lineage4.1 | None |
| ERR9786604 | Other | None | |
| SRR5341333 | Other | lineage2.1;lineage4.9 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR3675232 | Other | lineage4.1.2.1 | None |
| SRR1173778 | Other | lineage4.9 | None |
| ERR4818021 | Other | La1.2.BCG;La1.8.1 | None |
| SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR9786569 | Other | lineage4.8 | None |
| SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| ERR6358755 | Other | lineage4.6.1.1 | None |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR4817893 | Other | La3;lineage4.8 | None |
| SRR20969677 | HR-TB | La3;lineage2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR9786682 | Other | lineage4.1.2.1 | None |
| SRR19303884 | Other | lineage2.1;lineage6.3 | None |
| ERR4815604 | Other | None | |
| ERR4797588 | MDR-TB | lineage3 | None |
| SRR1196546 | Other | lineage4.9 | None |
| SRR6458423 | HR-TB | lineage2.2.1 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR3675236 | Other | None | |
| ERR176793 | Other | lineage4.1.1.1 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR3804169 | HR-TB | lineage4.1.3 | None |
| SRR1172728 | RR-TB | La3 | None |
| ERR323043 | Other | lineage2.1;lineage4.9 | None |
| SRR28119752 | Other | lineage4.9 | None |
| ERR4798493 | MDR-TB | lineage2.2.1 | None |
| ERR4816559 | MDR-TB | lineage4.4.1.1 | None |
| SRR7496472 | Other | lineage4.9 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR9786671 | Other | None | |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| ERR3283036 | Other | lineage2.1;lineage4.9 | None |
| ERR4407463 | HR-TB | None | |
| ERR9787165 | Other | lineage6.1.3 | None |
| SRR18213713 | HR-TB | None | |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR3283019 | Other | lineage2.1;lineage4.9 | None |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4819932 | Other | lineage4.7 | None |
| SRR3416776 | Other | lineage2.1 | None |
| ERR9117721 | HR-TB | La3;lineage1.1.2 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4816585 | Other | lineage2.2 | None |
| SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR6046066 | Other | lineage4.9 | None |
| ERR2027263 | Other | lineage4 | None |
| SRR6789626 | Other | None | |
| SRR6485010 | MDR-TB | lineage2.2.1 | None |
| SRR3675524 | Other | lineage4.9;lineage6.3 | None |
| ERR9117805 | Other | lineage4.3.2 | None |
| ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| ERR1023509 | Other | lineage4.9 | None |
| ERR9786611 | HR-TB | lineage4.1.3 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR3675581 | Other | lineage2.1;lineage4.9 | None |
| ERR736867 | Other | lineage2.1;lineage4.9 | None |
