lineage | Count |
---|---|
lineage2.2.1 | 6 |
68 | |
lineage4.9 | 3 |
lineage4.2.1.1 | 1 |
lineage4.1.2.1 | 6 |
lineage3.1.1 | 1 |
lineage1.2.2.2 | 2 |
lineage4.3.4.2.1 | 4 |
lineage4.1.1.3.1 | 1 |
lineage4.8.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.8 | 2 |
lineage4.1.3 | 2 |
lineage3 | 1 |
lineage4 | 1 |
La1 | 1 |
lineage6 | 1 |
lineage2 | 1 |
lineage4.5 | 1 |
lineage9 | 1 |
lineage4.3 | 1 |
La1.8.1 | 1 |
lineage4.9.1 | 1 |
lineage1.1.3.2 | 1 |
lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 110 |
ID | Drug resistance | Lineage | Country iso2 | ERR4819781 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | SRR5341333 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045526 | HR-TB | None | ERR4830353 | Other | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789626 | Other | None | SRR7496517 | Other | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR046874 | Sensitive | lineage4.1.2.1 | gb | ERR323043 | HR-TB | None | ERR046770 | Sensitive | lineage3.1.1 | gb | ERR046824 | Sensitive | lineage1.2.2.2 | gb | ERR046837 | Sensitive | lineage4.3.4.2.1 | gb | ERR046787 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046820 | Sensitive | lineage4.8.2 | gb | ERR046871 | Sensitive | lineage4.3.4.2.1 | gb | ERR046880 | Sensitive | lineage1.2.2.2 | gb | ERR067681 | HR-TB | None | ERR046897 | Sensitive | lineage4.4.1.1 | gb | ERR046956 | Sensitive | lineage4.9 | None | ERR046998 | Sensitive | lineage4.8 | gb | ERR3283036 | HR-TB | None | ERR1193689 | Sensitive | lineage4.3.4.2.1 | sd | ERR133986 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3439432 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798099 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4407463 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4810741 | HR-TB | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR5336148 | Other | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736867 | HR-TB | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | SRR1173400 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1184294 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR1184380 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | ERR181315 | MDR-TB | lineage9 | so | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675311 | Other | None | SRR3675221 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR212121 | HR-TB | None | ERR2229560 | Sensitive | lineage4.8 | None | SRR3675501 | HR-TB | None | SRR3675502 | Other | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | SRR3742665 | HR-TB | None | ERR234128 | Sensitive | lineage2.2.1 | cn | ERR245714 | Sensitive | lineage4.9.1 | mw | ERR245683 | Sensitive | lineage4.3.4.2.1 | mw | ERR245790 | Sensitive | None | ERR245822 | Other | lineage1.1.3.2 | None | SRR5341418 | Other | None | ERR245813 | Sensitive | lineage1.1.2 | mw | ERR245831 | Sensitive | lineage2.2.1 | mw |
---|