Rv0407 - c.195C>G
Drug resistance types
5 Sensitive
1 RR-TB
15 HR-TB
3 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 8 |
| 12 | |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.9 | 6 |
| lineage4.1.2.1 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage2.1;lineage4.9 | 6 |
| lineage4.6.1.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage1.2.2.2;lineage2.2.1 | 2 |
| lineage2.2.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.8 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR27450352 | Sensitive | lineage1.2.2.2 | None | SRR7496509 | Other | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR1184381 | MDR-TB | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786671 | Other | None | SRR28045383 | HR-TB | lineage1.2.2.2 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1196768 | MDR-TB | None | SRR28046287 | Sensitive | lineage1.2.2.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR7496517 | Other | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6789626 | Other | None | SRR1196546 | Other | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR25827293 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR6789621 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786604 | Other | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4798308 | MDR-TB | lineage1.2.2.2 | in | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR29126490 | Sensitive | lineage1.2.2.2 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR4796443 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR25827617 | XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797070 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9787197 | Other | None | ERR234659 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR9786569 | Other | lineage4.8 | None | SRR1196583 | Other | lineage4.9 | None | SRR21689454 | HR-TB | lineage1.2.2.2 | None | SRR18213713 | HR-TB | None | SRR22251070 | Sensitive | lineage1.2.2.2 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR4798583 | Sensitive | lineage1.2.2.2 | in | SRR3675236 | Other | None |
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