Rv2245 - c.-62_-60delATTinsCTG
Drug resistance types
2 Sensitive
0 RR-TB
82 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| 88 | |
| La1.8.1 | 1 |
| lineage4.9 | 2 |
| lineage4 | 2 |
| lineage2.2.1 | 1 |
| La2 | 1 |
| lineage3.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.1.2.1 | 4 |
| lineage4.6.2.2 | 3 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage6 | 1 |
| La3 | 1 |
| lineage4.5 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage2 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 116 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | SRR3742665 | HR-TB | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675572 | Other | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | SRR7496472 | Other | None | SRR5341470 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341302 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR323038 | HR-TB | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR3283032 | HR-TB | None | ERR323063 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4810741 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR702406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | ERR8976043 | HR-TB | None | ERR736865 | HR-TB | None | ERR736835 | HR-TB | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | ERR9787165 | Other | lineage6 | None | ERR9787197 | Other | None | SRR1184372 | MDR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173788 | Other | None | SRR1169249 | Other | La3 | None | SRR1173629 | Other | None | SRR1174897 | HR-TB | None | SRR1184294 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1184380 | HR-TB | None | SRR15368973 | Other | None | SRR12416824 | HR-TB | None | SRR19303884 | HR-TB | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR6325445 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675488 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675311 | Other | None | SRR3675383 | HR-TB | None |
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