Rv2245 - c.-15T>G
Drug resistance types
2 Sensitive
0 RR-TB
11 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| 6 | |
| lineage2.2.1 | 1 |
| lineage4.9;lineage6.3 | 3 |
| lineage4.6.2.2 | 3 |
| lineage4.1.2.1 | 4 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.3 | 2 |
| La1.2.BCG | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR7496472 | Other | lineage4.9 | None |
| ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR7496517 | Other | None | |
| SRR6789626 | Other | None | |
| SRR6458423 | HR-TB | lineage2.2.1 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| ERR13265748 | Other | lineage4.9;lineage6.3 | None |
| ERR9786711 | Sensitive | lineage4.6.2.2 | None |
| ERR9786645 | Other | lineage4.6.2.2 | None |
| ERR3804155 | Other | lineage4.1.2.1 | None |
| SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR9786843 | Other | None | |
| ERR9787197 | Other | None | |
| SRR28119805 | Other | lineage4.9 | None |
| ERR9786671 | Other | None | |
| ERR3801503 | Sensitive | lineage4.6.2.2 | None |
| ERR9786604 | Other | None | |
| SRR3675457 | Other | lineage4.9 | None |
| SRR20969677 | HR-TB | La3;lineage2 | None |
| SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None |
| ERR9786611 | HR-TB | lineage4.1.3 | None |
| ERR4798262 | HR-TB | La1.2.BCG | None |
| SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
| ERR9786601 | Other | lineage4.1.2.1 | None |
| SRR28119756 | Other | lineage4.9;lineage6.3 | None |
| ERR9786694 | Other | lineage4.1.2.1 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| SRR28119717 | Other | lineage4.9;lineage6.3 | None |
| ERR9786682 | Other | lineage4.1.2.1 | None |
| SRR28119811 | Other | lineage2.2.1;lineage6.3 | None |
| SRR28119753 | Other | lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR3804169 | HR-TB | lineage4.1.3 | None |
