Rv0005 - c.1107C>T


Drug resistance types
35 Sensitive 8 RR-TB 17 HR-TB 13 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 48 Other
lineage Counts
lineage Count
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 5
lineage4.2.1 27
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
lineage4.9 22
lineage4.8 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.1.2.1 4
lineage4.1.1.3 6
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
La1.7;lineage4.9 5
lineage4.3.3 2
La1.7 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1 4
lineage2.2.1.1 3
lineage4.6.2.2 1
La1.6;lineage4 1
lineage1.2.2.1;lineage4.4.1.1 1
La3 2
M.canetti;lineage2.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1 1
La2;lineage4.9 1
lineage3.1 1
La1;lineage4.1.2 1
lineage6.1.2 1
8
La1.2.BCG 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage1 1
La1;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.1.2 1
lineage1.2.2.2 1
lineage4.9;lineage9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 124
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR7070228 Sensitive lineage4.2.1 None
ERR11082254 Sensitive lineage4.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1173355 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR7070307 Sensitive lineage4.2.1 None
SRR1173706 Other lineage4.9 None
ERR4828997 Sensitive lineage4.1.2.1 None
ERR4821647 Sensitive lineage4.2.1 gb
ERR9027249 Sensitive lineage4.2.1 None
ERR4024562 Sensitive lineage4.1.1.3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4821723 Sensitive lineage4.2.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4816675 Sensitive lineage4.2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR3804155 Other lineage4.1.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR21798471 Sensitive lineage4.2.1 None
ERR2516515 Sensitive lineage4.1.1.3 pe
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR2513006 Sensitive lineage4.2.1 gb
ERR9786642 Other lineage4.1.2.1 None
SRR28351554 Other La1.6;lineage4 None
ERR6866807 RR-TB lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR2512826 Other La3 None
ERR2512817 Sensitive lineage4.2.1 gb
SRR7069732 Sensitive lineage4.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4815996 Sensitive lineage4.2.1 gb
SRR1173778 Other lineage4.9 None
ERR11049328 Sensitive lineage4.2.1 None
ERR4769521 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR2513529 Sensitive lineage4.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR7069403 Sensitive lineage4.2.1 None
ERR11049324 Sensitive lineage4.2.1 None
ERR6866046 Sensitive lineage4.1.1.3 None
SRR1172951 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR7069740 Sensitive lineage4.2.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR9970978 Other La1;lineage4.1.2 None
SRR1196546 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9787030 RR-TB lineage6.1.2 None
ERR11050821 Sensitive lineage4.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1173363 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR1196768 MDR-TB None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR2513309 Sensitive lineage4.2.1 gb
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR12549784 Sensitive lineage4.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4025073 Sensitive lineage4.1.1.3 None
SRR7070404 Sensitive lineage4.2.1 None
ERR2513040 Sensitive lineage4.2.1 gb
ERR4818098 Sensitive lineage4.2.1 None
SRR1173384 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
ERR6866049 Sensitive lineage4.1.1.3 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR7070129 Other La3 None
ERR2514706 Sensitive lineage4.2.1 gb
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4818347 Other lineage4.1.2 None
ERR4797201 Other lineage1.2.2.2 None
ERR2514638 Sensitive lineage4.2.1 gb
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR2513334 Sensitive lineage4.2.1 gb
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1184381 MDR-TB None
ERR9786671 Other None
ERR9786604 Other None
ERR234659 HR-TB None