Rv3793 - p.Ala95Thr
Drug resistance types
4 Sensitive
1 RR-TB
13 HR-TB
3 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.9 | 4 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.2.1 | 6 |
| lineage2.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| 3 | |
| lineage4.1.2.1 | 3 |
| La3;lineage2 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 38 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR10040471 | Pre-XDR-TB | lineage2.2.1 | None | ERR2020046 | MDR-TB | lineage2.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | ERR9786604 | Other | None | SRR24710141 | MDR-TB | lineage2.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR2020075 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515732 | Sensitive | lineage4.5 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR234659 | Other | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR24709961 | MDR-TB | lineage2.2.1 | None | ERR13291883 | Sensitive | lineage4.1.1.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR21709621 | Sensitive | lineage4.1.1.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675236 | Other | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
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