Rv3794 - c.1387_1389delTTGinsCTC
Drug resistance types
0 Sensitive
1 RR-TB
7 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.3 | 2 |
| 12 | |
| lineage4.9 | 5 |
| lineage2.1 | 2 |
| La3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 7 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | None | ERR4811075 | Other | None | ERR4811142 | RR-TB | None | SRR28119753 | Other | lineage4.9 | None | ERR4811311 | Other | None | SRR12416824 | HR-TB | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR1172817 | Other | La3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR6789626 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675236 | Other | None | ERR702406 | Other | lineage2.1 | None | SRR28119811 | Other | lineage2.2.1 | None | SRR7496509 | Other | None | SRR28119752 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None |
|---|
