Rv3794 - c.2919A>G
Drug resistance types
25 Sensitive
5 RR-TB
13 HR-TB
8 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.8 | 29 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.1.2.1 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage2.1;lineage4.9 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.9;lineage6.3 | 4 |
| 4 | |
| lineage4.9 | 5 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.1.3 | 2 |
| lineage2.2.1 | 1 |
| lineage2.1 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 90 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR22251913 | Sensitive | lineage4.8 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR2513895 | Sensitive | lineage4.8 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR4820001 | Sensitive | lineage4.8 | gb | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR7496472 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR21798461 | Sensitive | lineage4.8 | None | ERR4815500 | Sensitive | lineage4.8 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4821371 | Sensitive | lineage4.8 | gb | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR11043709 | Sensitive | lineage4.8 | None | SRR3085344 | Sensitive | lineage4.8 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28498408 | Sensitive | lineage4.8 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR28119777 | Other | lineage4.9 | None | SRR5486905 | RR-TB | lineage4.8 | None | SRR3082097 | Sensitive | lineage4.8 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11049086 | Sensitive | lineage4.8 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6832543 | Sensitive | lineage4.8 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR11081264 | HR-TB | lineage4.8 | None | ERR4817860 | Sensitive | lineage4.8 | None | SRR21798460 | Sensitive | lineage4.8 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR11082673 | MDR-TB | lineage4.8 | None | SRR23340112 | Sensitive | lineage4.8 | None | SRR14782255 | Sensitive | lineage4.8 | None | SRR22249384 | Sensitive | lineage4.8 | None | SRR25827682 | Other | None | ERR9787197 | Other | None | SRR3675236 | Other | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3323725 | Sensitive | lineage4.8 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR21798504 | Sensitive | lineage4.8 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4816765 | Sensitive | lineage4.8 | gb | SRR14801533 | Sensitive | lineage4.8 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR4831315 | Sensitive | lineage4.8 | de | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4818049 | Sensitive | lineage4.8 | gb | SRR18714827 | Sensitive | lineage4.8 | None | ERR4819844 | Other | lineage4.8 | None | SRR22249888 | Sensitive | lineage4.8 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
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