Rv0006 - c.-404G>C
Drug resistance types
32 Sensitive
2 RR-TB
41 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| 43 | |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage5.2 | 2 |
| lineage4.8 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 3 |
| lineage6.3.1 | 1 |
| lineage6 | 1 |
| lineage4.9 | 32 |
| lineage2.2.1 | 5 |
| lineage4.5 | 2 |
| lineage1.1.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage3 | 2 |
| lineage4.3.4 | 1 |
| lineage4 | 20 |
| La1.8.1 | 1 |
| lineage2.2 | 2 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 128 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR702406 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736867 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1175513 | Other | lineage4.9 | None | ERR9787197 | Other | None | SRR13837423 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13837450 | Sensitive | lineage4.9 | None | SRR13837451 | Sensitive | lineage4.9 | None | SRR13837434 | Sensitive | lineage4.9 | None | SRR13838008 | Sensitive | lineage4.9 | None | SRR13837659 | Sensitive | lineage4.9 | None | SRR13837658 | Sensitive | lineage4.9 | None | SRR13837816 | Sensitive | lineage4.9 | None | SRR13837817 | Sensitive | lineage4.9 | None | SRR13837932 | Sensitive | lineage4.9 | None | SRR13861527 | Sensitive | lineage4.9 | None | SRR13861362 | Other | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861723 | Sensitive | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR19303884 | HR-TB | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR25207267 | Pre-XDR-TB | lineage4.5 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR6650106 | Other | lineage3 | None | ERR181744 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675236 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675311 | Other | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | ERR212123 | Other | None | ERR4818021 | Other | La1.8.1 | None | SRR3675571 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | SRR7496472 | Other | None | ERR4821057 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045503 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045233 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045399 | Other | None | SRR6046385 | Other | lineage4.9 | None | ERR4830353 | Other | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046540 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831638 | Sensitive | None | ERR294266 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR502532 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR1034652 | Other | None | ERR1063855 | Other | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR5336148 | Other | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797069 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR6358991 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798431 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None |
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