Rv1484 - c.-346T>C
Drug resistance types
5 Sensitive
1 RR-TB
17 HR-TB
2 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 16 |
| lineage4.9;lineage6.3 | 6 |
| lineage2.1;lineage4.9 | 5 |
| lineage4.1.2.1 | 4 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2.1 | 3 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| 7 | |
| lineage4.1.3 | 2 |
| La1;lineage4.1.2 | 1 |
| La1.2.BCG | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.8 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage3 | 1 |
| La3;lineage2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4796254 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR3675248 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR28119777 | Other | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR25827778 | MDR-TB | lineage2.2.1 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR7496472 | Other | lineage4.9 | None | SRR28351342 | HR-TB | lineage2.2.1;lineage4 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR10808730 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | SRR3675457 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR25827566 | Sensitive | lineage3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR25827407 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9117709 | Other | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR25827561 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR736875 | HR-TB | lineage4.9 | None |
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