lineage | Count |
---|---|
lineage2.1;lineage4.9 | 9 |
lineage4.9 | 7 |
lineage4.1.2.1 | 4 |
lineage2.2.1 | 3 |
lineage6.1.3 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 5 |
lineage4.6.1.1 | 1 |
lineage2.2.1.2 | 1 |
10 | |
lineage4.1.3 | 1 |
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
lineage4.9;lineage6.3 | 5 |
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
lineage2.1 | 2 |
lineage4.1.2 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
La3;lineage2 | 1 |
lineage4.8 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
lineage5.2 | 2 |
lineage3 | 1 |
lineage4.4.1.1 | 1 |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
lineage2.2 | 1 |
La3;lineage2.2.1 | 1 |
lineage4 | 1 |
lineage2.1;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR323043 | Other | lineage2.1;lineage4.9 | None |
SRR7496472 | Other | lineage4.9 | None |
ERR3804155 | Other | lineage4.1.2.1 | None |
ERR3797070 | Other | lineage4.9 | None |
ERR4814352 | Other | lineage2.2.1 | None |
SRR6045380 | Other | lineage2.1;lineage4.9 | None |
ERR9787165 | Other | lineage6.1.3 | None |
ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
ERR6358755 | Other | lineage4.6.1.1 | None |
ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None |
ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
SRR6789626 | Other | None | |
ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
ERR3804169 | HR-TB | lineage4.1.3 | None |
SRR1173400 | Other | lineage4.9 | None |
SRR3675581 | Other | lineage2.1;lineage4.9 | None |
ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None |
ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
SRR6046225 | Other | lineage4.9;lineage6.3 | None |
SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
ERR234659 | Other | None | |
ERR9786601 | Other | lineage4.1.2.1 | None |
SRR12142341 | HR-TB | lineage2.1 | None |
ERR9786604 | Other | None | |
ERR4818347 | Other | lineage4.1.2 | None |
ERR13265528 | Other | lineage4.9;lineage6.3 | None |
SRR1173778 | Other | lineage4.9 | None |
SRR1196768 | MDR-TB | None | |
ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
ERR3283019 | Other | lineage2.1;lineage4.9 | None |
ERR4815604 | Other | None | |
SRR20969677 | HR-TB | La3;lineage2 | None |
ERR4817735 | Other | lineage4.8 | None |
ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
SRR6044790 | Other | lineage2.1;lineage4.9 | None |
ERR4816999 | Other | None | |
SRR1184380 | Other | lineage2.1;lineage4.9 | None |
SRR6458423 | HR-TB | lineage2.2.1 | None |
ERR4872094 | MDR-TB | lineage5.2 | None |
ERR4800341 | Other | lineage3 | None |
ERR13265748 | Other | lineage4.9;lineage6.3 | None |
ERR9117709 | Other | None | |
ERR4816559 | MDR-TB | lineage4.4.1.1 | None |
SRR28119752 | Other | lineage4.9 | None |
SRR1184294 | Other | lineage4.9 | None |
ERR502912 | Other | lineage2.2.1 | None |
ERR9119500 | MDR-TB | lineage5.2 | None |
ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
ERR9786671 | Other | None | |
SRR5341333 | Other | lineage2.1;lineage4.9 | None |
SRR3675465 | Other | lineage4.9;lineage6.3 | None |
SRR6045242 | Other | lineage2.1;lineage4.9 | None |
ERR3283036 | Other | lineage2.1;lineage4.9 | None |
ERR9786694 | Other | lineage4.1.2.1 | None |
SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
ERR4818929 | HR-TB | lineage4.9 | None |
SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
ERR9786682 | Other | lineage4.1.2.1 | None |
ERR4816585 | Other | lineage2.2 | None |
SRR29055629 | MDR-TB | La3;lineage2.2.1 | None |
SRR3675236 | Other | None | |
SRR3675524 | Other | lineage4.9;lineage6.3 | None |
ERR3283044 | Other | lineage4 | None |
SRR7535086 | Other | None | |
ERR702406 | Other | lineage2.1 | None |
ERR5336148 | Other | lineage2.1;lineage6.3 | None |