Rv0006 - c.2043C>T


Drug resistance types
9 Sensitive 0 RR-TB 18 HR-TB 1 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 19 Other
lineage Counts
lineage Count
lineage1.1.2 5
lineage4.1.2.1 4
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage6.1.3 1
3
lineage4.9 4
La1.7;M.canetti;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1 1
La1.6;La3;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.5 5
lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.4.1 1
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
lineage4.1.1.1 1
lineage2.2.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 47
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4799939 Sensitive lineage1.1.2 in
ERR3804155 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9787197 Other None
ERR1035157 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR2513753 Sensitive lineage1.1.2 gb
ERR2179636 HR-TB lineage4.5 cn
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4821558 Sensitive lineage1.1.2 gb
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR11466499 Other lineage4.3.4.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786604 Other None
ERR11082307 Sensitive lineage4.9 None
SRR10305762 Sensitive lineage4.5 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1723939 HR-TB lineage4.5 cn
ERR4810772 Sensitive lineage4.5 cn
ERR3283042 HR-TB lineage4.9 None
ERR2179713 Sensitive lineage4.5 cn
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR4800412 Sensitive lineage1.1.2 in
ERR9786617 Other lineage4.1.1.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR22251273 Sensitive lineage1.1.2 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None