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SRA data
Rv0668
- c.2853T>C
Drug resistance types
4 Sensitive
0 RR-TB
13 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
8
6
lineage4.9
5
lineage4.1.2.1
5
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
lineage4.9;lineage6.3
3
lineage2.1;lineage4.9
2
lineage4.1.3
2
lineage2.1;lineage4.9;lineage6.3
2
La1.6;La3;lineage4.6.4;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
61
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11043036
HR-TB
lineage2.2.1
None
ERR13193800
Other
lineage2.2.1
None
ERR13230591
Sensitive
lineage2.2.1
None
ERR13242778
Pre-XDR-TB
lineage2.2.1
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR2027263
Other
lineage4
None
ERR2693230
HR-TB
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
None
ERR2693231
Other
La1.6;La3;lineage4.6.4;lineage4.9
None
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