Rv0001 - c.1311C>G


Drug resistance types
1 Sensitive 4 RR-TB 30 HR-TB 19 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 74 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.3 2
lineage2.1;lineage4.9 13
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.7 1
17
La3;lineage2.1;lineage6.3 1
lineage4.9;lineage6.3 3
lineage3 2
lineage2.1;lineage6.3 2
La3;lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage6.3.1 1
lineage2.1;lineage4.9;lineage6.3 9
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.2.1 4
lineage4.9 22
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4.2.1 1
lineage4.1.2.1 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2 1
lineage2.1 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage6.1.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2 1
La3;lineage1.1.2 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
M.canetti;lineage4.9 2
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage4.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4 1
lineage4.4.1.1 1
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 130
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496523 Other lineage4.7 None
SRR7496509 Other None
ERR9786671 Other None
ERR9117709 Other None
SRR6789626 Other None
ERR234659 HR-TB None
ERR212001 HR-TB None
ERR9787197 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR1173400 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675572 Other None
SRR1184381 MDR-TB None
SRR3675236 Other None
SRR1196583 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4816466 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
SRR1184294 Other lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675457 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4797588 MDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR9786604 Other None
SRR1173363 Other None
SRR1184372 MDR-TB None
SRR18213713 HR-TB None
SRR7496517 Other None
ERR4407463 HR-TB None
SRR1196768 MDR-TB None
SRR3675502 Sensitive lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6045219 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR1172951 Other lineage4.9 None