Rv3795 - c.1053C>A


Drug resistance types
15 Sensitive 5 RR-TB 28 HR-TB 11 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 125 Other
lineage Counts
lineage Count
lineage4.8 1
lineage4.9 46
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage4.9 14
lineage1.1.2 1
M.canetti;lineage2.1;lineage4.9 2
La3;lineage4.9 3
La3;lineage1.1.2 1
lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.2 1
lineage2.1;lineage4.9;lineage6.3 8
M.canetti;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1 12
lineage4 3
lineage4.4.1.1 2
18
lineage4.2.2.2 1
lineage3 3
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.3.2.1 1
lineage4.1.3 2
La3 2
lineage2.1;lineage6.3 2
lineage2.1 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.2.2 1
lineage4.1.2.1 8
lineage4.2;lineage4.9 2
lineage2.2.2;lineage4 1
lineage4.9;lineage6.3 7
lineage4.8;lineage4.9 2
lineage4.6.1.1 1
lineage6.3.1 1
La3;lineage2 1
lineage2.2.1;lineage6.3 1
lineage1.2.2.2 1
lineage1.1.3.1 1
lineage2.2.1.1 2
lineage4.1.1.3 2
lineage4.1 1
lineage4.1.1.1 3
La3;lineage2.1;lineage6.3 1
La3;lineage2.2.1 2
lineage2.2.1;lineage3 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.7 1
lineage4.3.3 1
lineage6.1.3 1
La1.2.BCG;La1.8.1 1
spoligotype Counts
spoligotype Count
None 187
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR1184312 Other lineage2.2.1 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046521 Other lineage4.4.1.1 None
SRR29051077 Other lineage4.9 None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
ERR4797184 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1196546 Other lineage4.9 None
SRR29096527 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675236 Other None
ERR3804169 HR-TB lineage4.1.3 None
ERR1035122 Sensitive lineage4.9 None
ERR9117709 Other None
SRR1172817 Other La3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR29096225 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
ERR13265833 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9787197 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR29096541 Other lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR9787139 Other lineage6.3.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1169194 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675235 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR26159043 Other lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR4797201 Other lineage1.2.2.2 None
ERR4816466 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR1180172 Other lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR4407452 Other lineage3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR779852 Sensitive lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR502912 Other lineage2.2.1 None
SRR25827682 Other None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786440 Other lineage4.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR502511 Sensitive lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR18003019 Other lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR4798099 Other lineage4.9 None
ERR4815604 Other None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
SRR10315567 HR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR11465025 Other lineage4.1.1.3 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
SRR28119777 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675585 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
ERR4817060 Other None
SRR28119752 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR4797474 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR29051093 Other lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None