lineage | Count |
---|---|
110 | |
lineage4.9;La3 | 1 |
lineage4.1 | 1 |
lineage4.1.1 | 1 |
lineage2.2.1 | 2 |
lineage3;lineage2.1 | 1 |
lineage4.8 | 2 |
lineage4.1;lineage1 | 1 |
lineage2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1.2.1 | 6 |
lineage3.1 | 3 |
lineage4.9 | 2 |
lineage3 | 1 |
La1 | 1 |
lineage4.3.2 | 1 |
lineage2 | 2 |
spoligotype | Count |
---|---|
None | 137 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675465 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815604 | HR-TB | None | SRR6325445 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675236 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675234 | Other | None | SRR3675558 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | ERR4816999 | Other | None | SRR3675545 | HR-TB | None | SRR3675311 | Other | None | SRR3675383 | HR-TB | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR234659 | HR-TB | None | ERR2514692 | Other | None | ERR4818615 | Other | None | SRR5341302 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2693231 | Other | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045399 | Other | None | SRR6045327 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR1034652 | Other | None | ERR3283032 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797016 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR4810741 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4188350 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4811022 | HR-TB | None | ERR6358837 | HR-TB | None | ERR5336148 | Other | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | ERR702404 | HR-TB | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | SRR1174897 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9786843 | Other | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173400 | Other | None | SRR1173629 | Other | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173118 | Other | None | SRR1173778 | Other | None | SRR1184380 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196546 | HR-TB | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR11081257 | Other | lineage4.8 | None | SRR19303884 | HR-TB | None |
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