Rv3794 - c.1812G>C
Drug resistance types
0 Sensitive
1 RR-TB
18 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage1.1.2 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1 | 2 |
| 7 | |
| lineage4.9 | 4 |
| lineage2.1;lineage4.9 | 5 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819781 | Other | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4800341 | HR-TB | lineage3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR6789626 | Other | None | ERR4817060 | Other | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR9786604 | Other | None | ERR4815604 | Other | None | ERR9117709 | Other | None | ERR9787197 | Other | None | SRR3675236 | Other | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None |
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